Drug Discovery Tools for High-Content Analysis

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Publication Date: 2007-07-13

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The area of drug discovery tools is one of the newest and most important sectors of pharmaceutical research and development. The term drug discovery tools usually refers to high-content screening (HCS) and analysis and is composed of those applications that require sufficient levels of sample throughput, whereby complex cellular events and phenotypes can be studied. Elements of drug performance like toxicity and specificity can be established simultaneously using mixed cell types-primary cells, cell lines, cell subpopulations. HCS seeks to assess the impact of phenotypic and cellular changes that are brought about by gene modification (such as with RNA interference (RNAi) approaches) and/or drug (or compound) treatment. The purpose of this examination by TriMark Publications is to describe the specific segments of the global drug discovery tools market. Within this area, the report covers those segments that are highly active in terms of innovation and growth. Specifically, this study examines the markets for small lab equipment all the way up to highly automated, large automated platforms, as well as accessory equipment such as reagents, supplies and manufacturers' original equipment manufacturer (OEM) additional equipment.

Table of Contents

  • LIST OF FIGURES

  • Figure 2.1: Scope of Biological Parameters Addressed via a Typical HCA Experiment13
  • Figure 2.2: Classes of Assays in Life Science Research and Drug Discovery Illustrating the Relationship between Cell-based Assays and HCA14
  • Figure 2.3: New Paradigm of Drug Discovery and Development Illustrating the Central and Essential Role of Screening16
  • Figure 2.4: Cumulative and New Drug Targets29
  • Figure 3.1: Breakout of Market Survey Respondents by Geographical Location30
  • Figure 3.2: Breakout of Market Survey Respondents by Affiliation-Academic, Commercial, Vendor30
  • Figure 3.3: Segmentation of Respondent Pool based upon Usage of HCA in its Research Activities31
  • Figure 3.4: Segmentation of the Survey Respondent Pool based upon the Length of Time they have been Using HCA in their Research Activities31
  • Figure 3.5: Number of Parameters Studied Simultaneously in HCA Assays-Multivariate [Multi-Parameter] Analyses33
  • Figure 3.6: Key Biological Processes Studied Utilizing HCA Tools34
  • Figure 3.7: Breakout of HCA Assays Currently Performed or Expected to be Performed in the Future by Biological Pathway (or Target)35
  • Figure 3.8: Breakout of HCA Experiments Performed Per Week (Distributed in our Respondent Pool) Across the Various Biological Pathways (and Targets)35
  • Figure 3.9: Which of the Biologies (Pathways/Targets) Addressed Using HCA-based Approaches are Growing in Importance or Declining?36
  • Figure 3.10: In Which Environment are HCA Assays Performed-Primary Screen, Secondary Screen, ADME/Tox Screen?37
  • Figure 3.11: Key Challenges Faced by the Research Community in Their Practice of HCA38
  • Figure 3.12: Various Drivers that are Leading the Research Community to Perform HCA39
  • Figure 3.13: HCA Together with RNAi-Current and Future Experimental Formats40
  • Figure 3.14: HCA Together with RNAi-Number of Experiments Performed Per Month by the Survey Respondent Pool41
  • Figure 3.15: Growing and Steady Usage of the Various Formats where RNAi is coupled with HCA41
  • Figure 3.16: Penetration of the Different HCA Instrumentation Platforms into the Marketplace43
  • Figure 3.17: Instrumentation Platforms for HCA Ranked by Top Choice and Second Tier43
  • Figure 3.18: HCA Instrumentation and where they lie on the Throughput Curve44
  • Figure 3.19: Top Instrumentation Value Drivers in the HCA Space45
  • Figure 3.20: Important Sub-Cellular Features Studied via HCA Approaches46
  • Figure 3.21: Breakout of End-Point versus Kinetic Assays in the HCA Space46
  • Figure 3.22: Types of Cellular Targets Studied Using HCA Approaches47
  • Figure 3.23: Top-most Target Class Being Studied Utilizing HCA Approaches47
  • Figure 3.24: Distribution of HCA Experiments across the Respondent Pool-Number of Experiments Performed Per Week48
  • Figure 3.25: Average Reagent/Assay Costs Per HCA Experiment48
  • Figure 3.26: Stratification of Reagent/Assay Suppliers into the HCA Space49
  • Figure 3.27: Monthly Reagent/Assay Purchases for HCA by the End-User Community from the Various Vendors Offering Products into the Space50
  • Figure 3.28: Growth or Decline in Importance of the Various HCA Vendors to the End-User Community51
  • Figure 3.29: Percentage of HCA Experiments that Involve GFP across the Market Landscape52
  • Figure 3.30: Breakout of HCA Reagents Marketplace: Home-Brew Versus Off-the-Shelf52
  • Figure 3.31: Breakout of Spending into the Various Components of the HCA Discipline53
  • Figure 3.32: Forecast Growth of the Total Screening Space-Broken-out by Primary Screening, Secondary Screening (Includes HCA as a Subset) and ADME/Tox54
  • Figure 3.33: Forecast Growth of the Screening Space-Broken-out by Cell-based Assays and Biochemical Assays55
  • Figure 4.1: Drug Discovery and Development Ensemble and the Position of the Various Segments of HCA in the Space60
  • Figure 4.2: Relative Size and Position of the HCA Space in the Overall Scheme of the Life Science Tools Marketplace62
  • Figure 5.1: HCA: Positional Biosensors Using Caspases and Monitoring the Translocation of a Tagged Protein from the Cytoplasm to the Nucleus67
  • Figure 6.1: Druggability of the Various Target Classes: Breakout of the Drug Targets Today into their Constituent Classes70
  • Figure 6.2: GPCR Assay Technologies71


  • LIST OF TABLES

  • Table 2.1: Comparison of the Key Features of HCA and HCS11
  • Table 2.2: Impact of HCA on Drug Discovery-Several Drivers are Addressed12
  • Table 2.3: Biological Application Areas Associated with HCA13
  • Table 2.4: Classes of Measurements and Targets Identified Using Phenotypic Screening (HCA)14
  • Table 2.5: Classes of Cellular Measurements Possible with Fluorescent Protein Biosensors15
  • Table 2.6: Multi-Parameter HCA Assays to Study Biological Systems in Life Science Research and Drug Discovery-Demonstrates the Breadth and Scalability of the HCA Approach17
  • Table 2.7: Companies Offering Systems for High-Throughput Imaging18
  • Table 2.8: Comparison of the Major Instrumentation Platforms and their Associated Specifications for HCA-I19
  • Table 2.9: Comparison of the Major Instrumentation Platforms and their Associated Specifications for HCA-II19
  • Table 2.10: Price Points and Target Markets of the Various HCA Instrument Platforms20
  • Table 2.11: Companies Offering Flow Cytometry Products and Services20
  • Table 2.12: Integrated Product Platforms Offered by the Different HCA Vendors22
  • Table 2.13: Biologies interrogated by Cellomics HCA Assays24
  • Table 2.14: Cellomics HitKit® HCA Assay/Reagent Kits and the Therapeutic Areas Where They Find Application24
  • Table 2.15: Assay/Reagent Portfolio of Millipore Addressing HCA Applications25
  • Table 2.16: Cell Lines for GPCR HCA that can be Deployed onto the BD Biosciences/Atto Pathway HT™ Instrument Platform26
  • Table 2.17: Examples of High Content Screens28
  • Table 3.1: What Fraction of HCA Assays are Cell-based Versus Biochemical-based32
  • Table 4.1: Comparison of the Key Features of HCA and HCS58
  • Table 4.2: Snapshot of the Various HCA Assays Demonstrating the Scalability of this Discipline60
  • Table 5.1: Modes of Digital Imaging64
  • Table 5.2: Modes of Fluorescence64
  • Table 5.3: Major HCA Instrumentation65
  • Table 5.4: Image Analysis Algorithms67
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